Package | Description |
---|---|
org.simmetrics.metrics | |
org.simmetrics.metrics.functions |
Constructor and Description |
---|
NeedlemanWunch(float gapValue,
Substitution substitution)
Constructs a new Needleman-Wunch metric.
|
SmithWaterman(Gap gap,
Substitution substitution,
int windowSize)
Constructs a new Smith Waterman metric.
|
SmithWatermanGotoh(float gapValue,
Substitution substitution)
Constructs a new Smith Waterman metric.
|
Modifier and Type | Class and Description |
---|---|
class |
MatchMismatch
A substitution function that assigns one value to equal characters, another
value to unequal characters.
|
Copyright © 2014–2018. All rights reserved.